Biggest tissue box coordinates are inverted (PIL -> NumPy) #184
Description
Describe the bug
Tiler's area of extraction is wrong, i.e. the biggest tissue box coordinates (W,H) are inverted (H,W)
To Reproduce
Steps to reproduce the behavior:
from histolab.data import prostate_tissue
from histolab.slide import Slide
from histolab.tiler import GridTiler
f, path = prostate_tissue()
prostate_slide = Slide(path, 'proc')
grid_tiles_extractor = GridTiler(
tile_size=(400, 200),
level=0,
check_tissue=False,
pixel_overlap=0, # default
prefix="grid/",
suffix=".png"
grid_tiles_extractor.locate_tiles(prostate_slide)Expected behavior
Instead....
Software (please complete the following information):
- OS: macOS
- Python Version: 3.8
Additional context
It has to do with: https://stackoverflow.com/questions/49084846/why-different-size-when-converting-pil-image-to-numpy-array