BioThings Studio tutorial

Automated preprocessing of Next-Generation-Sequencing data, including full ATAC-seq, ChIP-seq, and RNA-seq workflows. Take a look at the docs: https://vanheeringen-lab.github.io/seq2science

This is a generic Python client for BioThings APIs

Interactive Data Visualization in the browser, from Python

The fundamental package for scientific computing with Python.

Statistical data visualization in Python

Conda recipes for the bioconda channel.

Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples. http://anansepy.…

CLI interface for the PSAP classifier, Mierlo, G. van. Predicting protein condensate formation using machine learning (Manuscript in Preparation).

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

A python object for standardized reference genome assets.

A conda-smithy repository for sklearn-contrib-lightning.

A conda-smithy repository for bucketcache.

Python library to access Gene Expression Omnibus Database (GEO)

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-CEll regulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene reg…

Efficient pythonic random access to fasta subsequences

A toolkit to learn how to model and interpret regulatory sequence data using deep learning.

Utilities for building and managing bioconda recipes

R interface to the keras library

cache packages permanently