python bioinformatics algorithm pipeline tool clustering ngs sequencing example-data hi-c dbscan 3d-genome chia-pet chromatin-interaction stripes hichip chromatin-loops chromatin-stripes loops-calling trac-looping

python clustering next-generation-sequencing domains loops hi-c montage 3d-genome peaks chia-pet chromatin-interaction stripes hichip bioinformatics-tool trac-looping cloops2 3d-genome-visualization differential-enriched-loops un-limited-resolution rehoboam