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IndexError: list index out of range

Status: Open.

#92 In conchoecia/odp;

· aaannaw opened on Sep 3, 2025

Segmentation Fault: plot_synteny_nocolor

Status: Open.

#89 In conchoecia/odp;

· AttilaSzunyi opened on Jul 18, 2025

SyntaxError in line 294 - Unexpected keyword retries in rule definition (odp, line 294)

Status: Open.

#88 In conchoecia/odp;

· ddols opened on Jul 15, 2025

Differences between RBH-gene-coords and Chr-coords

Status: Open.

#87 In conchoecia/odp;

· lyy005 opened on Jul 10, 2025

Error running test files; died with <Signals.SIGSEGV: 11>.

Status: Open.

#85 In conchoecia/odp;

· DaPan89 opened on Apr 29, 2025

Getting rbh file for odp_genome_rearrangegment_simulation, and odp_nway_rbh nways question

Status: Open.

#84 In conchoecia/odp;

· mneitzey opened on Jan 25, 2025

How can I customize the color and chromosome order of the plot that odp_nway_rbh output?

Status: Open.

#83 In conchoecia/odp;

· hhzhao713 opened on Oct 10, 2024

Error running test again

Status: Open.

#82 In conchoecia/odp;

· aebaci opened on Sep 4, 2024

MissingInputException in line 289 of .../scripts/odp: Missing input files for rule n_ways_reciprocal_best:

Status: Open.

#80 In conchoecia/odp;

· piamer opened on Aug 7, 2024

hmmsearch --incE 1E-5 --tblout odp/step0-blastp_results/BCnSSimakov2022_against_Csch.hmmsearch --cpu 8 --noali --notextw /Share/user/dzw/software/odp/LG_db/BCnSSimakov2022/BCnSSimakov2022.hmm odp/db/Csch_prots.pep > /dev/null

Status: Open.

#79 In conchoecia/odp;

· dzwzs opened on Jun 26, 2024

Unexpected keyword retries in rule definition (odp, line 294)

Status: Open.

#78 In conchoecia/odp;

· LittleFrogHill opened on Jun 24, 2024

running on M1 mac issues, solved!

Status: Open.

#77 In conchoecia/odp;

· madeleineaaseremedios opened on Jun 19, 2024