-
Notifications
You must be signed in to change notification settings - Fork 2
UFAL/Resource type to Data Cite DOI #975
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Conversation
|
Warning Rate limit exceeded@Paurikova2 has exceeded the limit for the number of commits or files that can be reviewed per hour. Please wait 18 minutes and 31 seconds before requesting another review. ⌛ How to resolve this issue?After the wait time has elapsed, a review can be triggered using the We recommend that you space out your commits to avoid hitting the rate limit. 🚦 How do rate limits work?CodeRabbit enforces hourly rate limits for each developer per organization. Our paid plans have higher rate limits than the trial, open-source and free plans. In all cases, we re-allow further reviews after a brief timeout. Please see our FAQ for further information. 📒 Files selected for processing (1)
Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out. 🪧 TipsChatThere are 3 ways to chat with CodeRabbit:
SupportNeed help? Create a ticket on our support page for assistance with any issues or questions. Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments. CodeRabbit Commands (Invoked using PR comments)
Other keywords and placeholders
CodeRabbit Configuration File (
|
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Pull Request Overview
Adds support for mapping new UFAL resource types to the DataCite <resourceType> element in the DIM2DataCite XSLT.
- Introduces a
typeValuevariable from the firstdc.typetoken - Handles four new types (
corpus,lexicalConceptualResource,languageDescription,toolService) withresourceTypeGeneral="Other" - Falls back to the existing single-element mapping for other types
Comments suppressed due to low confidence (1)
dspace/config/crosswalks/DIM2DataCite.xsl:516
- There are no tests covering these new resourceType mappings. Please add unit or integration tests to verify that 'corpus', 'lexicalConceptualResource', 'languageDescription', and 'toolService' produce the correct
<resourceType>output.
<xsl:when test="$typeValue = 'corpus'">
* UFAL/DOI - Added type of resource to data cite (#975) * UFAL/The process output is not displayed because of S3 direct download (#971) * Check if type is html (#983) * Ufal dtq sync062025 (#985) * we should identify as clarin-dspace * update email templates to use dspace.shortname * match v5 submission * get rid of lr.help.phone * Add option to configure oai sample identifier * NRP deposit * UFAL/Improve file preview generating (#972) --------- Co-authored-by: milanmajchrak <[email protected]> * Fix the file preview integration test (#989) * The hasPreview method has been changed, but the IT wasn't updated correctly --------- Co-authored-by: Paurikova2 <[email protected]> Co-authored-by: Ondřej Košarko <[email protected]>
* UFAL/DOI - Added type of resource to data cite (#975) * UFAL/The process output is not displayed because of S3 direct download (#971) * The S3 direct download is provided only for the files located in the ORIGINAL bundle * Use constant for the ORIGINAL string value * Check if type is html (#983) * check if type is html * added test for html mime type * used static string for text/html, added check * Ufal dtq sync062025 (#985) * we should identify as clarin-dspace Fix test (cherry picked from commit 6cdf2d1) * update email templates to use dspace.shortname dspace.name can be a long string not fit for Email subjects nor signatures (cherry picked from commit 98d60dd) * match v5 submission (cherry picked from commit 4a2b65f) * get rid of lr.help.phone Phone is now conditional in the templates. Use `mail.message.helpdesk.telephone` if you want it. The change in the *.java files is to preserve the params counts. The relevant templates are getting the phone directly from config (cherry picked from commit cba5695) * Add option to configure oai sample identifier some validators use this value, should be a real id in prod deployments (cherry picked from commit 912f13f) * NRP deposit license (cherry picked from commit ba23878) * Fix ufal#1219 Get rid of setting the jsse.enableSNIExtension property which causes issues with handle minting (cherry picked from commit 7d03173) * UFAL/Improve file preview generating (#972) * get name and size from metadata and header of file, avoid input stream using * remove temp file, checkstyle, do not load full file * add { } after if * added check for max preview file * used ZipFile and TarArchived for filepreview generating * added removed lines * used 7z for zip and tar files * removed 7z and used zip and tar entry * improved file previrew generating speed, used string builder, xml builder, authorization only if is required * checkstyle, return boolean from haspreview and previrews from getPreview, replaced return with continue * fix problem with hibernate session * fix .tar.gz generating * skip fully entry for tar * added indexes for speed up queries * added license header * named constant by upper case * inicialized fileInfo, refactorization of code based on copilot review --------- Co-authored-by: milanmajchrak <[email protected]> * Fix the file preview integration test (#989) * The hasPreview method has been changed, but the IT wasn't updated correctly * Use the correct checkbox for the input field - use repeatable (#991) * UFAL/EU Sponsor openaire id should not be required (#1001) * EU Sponsor openaire id should not be required * Not required also in the czech submission forms * Logging error message while emailing users (#1000) * Logging error message --------- Co-authored-by: Matus Kasak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * UFAL/Teaching and clariah submissions does not have clarin-license (#1005) * UFAL/Fix logging in LogoImportController (#1003) * fix logging * used formatter for msg * UFAL/Update the resource policy rights when changing submitter (#1002) * removed res policies for submitter and created newones when item is shared * avoid magic number, use constant * set submitter in existing res policies * removed not used shared link * UFAL/Added date to title when creating new version (#984) * added date to versioned item title * used more modern approach for getting current time * renamed test * used var for reusing * UFAL/Item handle info in email after download request (#1006) * Added item handle to email * Exception when item not found * Checked grammar * Handled multiple items found by bitstream * Using PID instead of handle --------- Co-authored-by: Matus Kasak <[email protected]> --------- Co-authored-by: Paurikova2 <[email protected]> Co-authored-by: Ondřej Košarko <[email protected]> Co-authored-by: Kasinhou <[email protected]> Co-authored-by: Matus Kasak <[email protected]> Co-authored-by: jurinecko <[email protected]>
dataquest-dev/dtq-dev sync Syncing dtq-dev ~lindat-2025.07.16198085191. This contains the following changes: UFAL/DOI - Added type of resource to data cite (dataquest-dev#975) Check if type is html (dataquest-dev#983) UFAL/Improve file preview generating (dataquest-dev#972) UFAL/Fix logging in LogoImportController (dataquest-dev#1003) UFAL/Update the resource policy rights when changing submitter (dataquest-dev#1002) UFAL/Added date to title when creating new version (dataquest-dev#984) UFAL/The process output is not displayed because of S3 direct download (dataquest-dev#971) Fix the file preview integration test (dataquest-dev#989) Use the correct checkbox for the input field - use repeatable (dataquest-dev#991) UFAL/EU Sponsor openaire id should not be required (dataquest-dev#1001) Logging error message while emailing users (dataquest-dev#1000) UFAL/Item handle info in email after download request (dataquest-dev#1006) Ufal dtq sync062025 (dataquest-dev#985) Merge commit '33d330a' into HEAD UFAL/Teaching and clariah submissions does not have clarin-license (dataquest-dev#1005)
* UFAL/DOI - Added type of resource to data cite (#975) * UFAL/The process output is not displayed because of S3 direct download (#971) * The S3 direct download is provided only for the files located in the ORIGINAL bundle * Use constant for the ORIGINAL string value * Check if type is html (#983) * check if type is html * added test for html mime type * used static string for text/html, added check * Ufal dtq sync062025 (#985) * we should identify as clarin-dspace Fix test (cherry picked from commit 6cdf2d1) * update email templates to use dspace.shortname dspace.name can be a long string not fit for Email subjects nor signatures (cherry picked from commit 98d60dd) * match v5 submission (cherry picked from commit 4a2b65f) * get rid of lr.help.phone Phone is now conditional in the templates. Use `mail.message.helpdesk.telephone` if you want it. The change in the *.java files is to preserve the params counts. The relevant templates are getting the phone directly from config (cherry picked from commit cba5695) * Add option to configure oai sample identifier some validators use this value, should be a real id in prod deployments (cherry picked from commit 912f13f) * NRP deposit license (cherry picked from commit ba23878) * Fix ufal#1219 Get rid of setting the jsse.enableSNIExtension property which causes issues with handle minting (cherry picked from commit 7d03173) * UFAL/Improve file preview generating (#972) * get name and size from metadata and header of file, avoid input stream using * remove temp file, checkstyle, do not load full file * add { } after if * added check for max preview file * used ZipFile and TarArchived for filepreview generating * added removed lines * used 7z for zip and tar files * removed 7z and used zip and tar entry * improved file previrew generating speed, used string builder, xml builder, authorization only if is required * checkstyle, return boolean from haspreview and previrews from getPreview, replaced return with continue * fix problem with hibernate session * fix .tar.gz generating * skip fully entry for tar * added indexes for speed up queries * added license header * named constant by upper case * inicialized fileInfo, refactorization of code based on copilot review --------- Co-authored-by: milanmajchrak <[email protected]> * Fix the file preview integration test (#989) * The hasPreview method has been changed, but the IT wasn't updated correctly * Use the correct checkbox for the input field - use repeatable (#991) * UFAL/EU Sponsor openaire id should not be required (#1001) * EU Sponsor openaire id should not be required * Not required also in the czech submission forms * Logging error message while emailing users (#1000) * Logging error message --------- Co-authored-by: Matus Kasak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * UFAL/Teaching and clariah submissions does not have clarin-license (#1005) * UFAL/Fix logging in LogoImportController (#1003) * fix logging * used formatter for msg * UFAL/Update the resource policy rights when changing submitter (#1002) * removed res policies for submitter and created newones when item is shared * avoid magic number, use constant * set submitter in existing res policies * removed not used shared link * UFAL/Added date to title when creating new version (#984) * added date to versioned item title * used more modern approach for getting current time * renamed test * used var for reusing * UFAL/Item handle info in email after download request (#1006) * Added item handle to email * Exception when item not found * Checked grammar * Handled multiple items found by bitstream * Using PID instead of handle --------- Co-authored-by: Matus Kasak <[email protected]> * UFAL/Incorrect password hash funct used during migration (#999) * password in request is already hashed, used different password hash funct * renamed password param in eperson endpoint * [devOps] labelling reviewing process * [devOps] labelling reviewing process * UFAL/New version keeps the old identifier * UFAL/Send email to editor after submitting item (#1016) Co-authored-by: Matus Kasak <[email protected]> * UFAL/Local file size is 0 for file with no zero size (#1017) * update item metadata after the bitstream size has changed * issue 1241: ItemFilesMetadataRepair script implementation (DSpace#1243) (#1021) * issue 1241: ItemFilesMetadataRepair script implementation * extend script to be applicabble for all items, and for items with files metadata that have missing bitstreams (files) * implement dry-run option * option description fix * Improve error message * Use "0" instead of "" + 0 * Improve error message (cherry picked from commit 706f6f6) Co-authored-by: kuchtiak-ufal <[email protected]> * UFAL/Refbox upgrade (#1015) * Created integration test * Created an endpoint for complete ref box information like in the v5 * Added integration tests for formatting authors * Removed double semicolon * Fetch the metadata value following the current locale * Updated firstMetadataValue because it did return empty string instead of null * Use DEFAULT_LANGUAGE instead of current locale * UFAL/Added doc - issue link (#1023) --------- Co-authored-by: Paurikova2 <[email protected]> Co-authored-by: Ondřej Košarko <[email protected]> Co-authored-by: Kasinhou <[email protected]> Co-authored-by: Matus Kasak <[email protected]> Co-authored-by: jurinecko <[email protected]> Co-authored-by: jm <jm@maz> Co-authored-by: kuchtiak-ufal <[email protected]>
Problem description
Since we define the type of resource when an item is created, if we want to enable DOI functionality, we need to add these types to DataCite.
Please divide PR #883 into two separate PRs:
The first should contain the general changes.
The second should include only the changes necessary for enabling DOI support.